Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11622 | Not Available | Negative | 3899752 - 3900030 | 10680.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_11623 | Not Available | Positive | 3900392 - 3903211 | 105401.0 |
| hypothetical protein | SAMN06296052_11624 | Not Available | Positive | 3903582 - 3906176 | 96866.6 |
| beta-galactosidase | SAMN06296052_11625 | Not Available | Positive | 3906299 - 3908728 | 91603.1 |
| glycosidase | SAMN06296052_11626 | Not Available | Positive | 3908842 - 3910440 | 60866.9 |
| galactokinase | SAMN06296052_11627 | Not Available | Positive | 3910573 - 3911721 | 42838.0 |
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN06296052_11628 | Not Available | Positive | 3911773 - 3912804 | 39429.4 |
| solute:na+ symporter, sss family | SAMN06296052_11629 | Not Available | Positive | 3912861 - 3914438 | 57415.4 |
| iron complex outermembrane recepter protein | SAMN06296052_11630 | Not Available | Positive | 3915137 - 3918175 | 111904.0 |
| starch-binding associating with outer membrane | SAMN06296052_11631 | Not Available | Positive | 3918189 - 3919781 | 59385.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
