Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11612 | Not Available | Negative | 3887097 - 3887498 | 15080.1 |
| arac-type dna-binding protein | SAMN06296052_11613 | Not Available | Positive | 3887641 - 3888222 | 22095.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06296052_11614 | Not Available | Negative | 3888327 - 3889805 | 53500.6 |
| ammonium transporter | SAMN06296052_11615 | Not Available | Negative | 3890084 - 3891454 | 48261.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN06296052_11616 | Not Available | Negative | 3891742 - 3892347 | 22892.8 |
| mfs transporter, fhs family, l-fucose permease | SAMN06296052_11617 | Not Available | Negative | 3892626 - 3894038 | 50173.7 |
| aldose 1-epimerase | SAMN06296052_11618 | Not Available | Negative | 3894164 - 3895309 | 41637.3 |
| small-conductance mechanosensitive channel | SAMN06296052_11619 | Not Available | Positive | 3895555 - 3896475 | 35431.7 |
| imidazolonepropionase | SAMN06296052_11620 | Not Available | Negative | 3896480 - 3897742 | 45673.5 |
| peptidase family m1 | SAMN06296052_11621 | Not Available | Negative | 3897884 - 3899548 | 64033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
