Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucomutase | SAMN06296052_1162 | Not Available | Negative | 3877133 - 3878866 | 64559.1 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN06296052_1163 | Not Available | Negative | 3879035 - 3880129 | 41451.2 |
| hypothetical protein | SAMN06296052_1164 | Not Available | Positive | 3880277 - 3880675 | 14965.2 |
| methylglyoxal synthase | SAMN06296052_1165 | Not Available | Positive | 3880874 - 3881239 | 13336.1 |
| hypothetical protein | SAMN06296052_1166 | Not Available | Positive | 3881633 - 3882232 | 22463.6 |
| tryptophanyl-trna synthetase | SAMN06296052_1167 | Not Available | Negative | 3882346 - 3883320 | 36631.8 |
| hypothetical protein | SAMN06296052_1168 | Not Available | Negative | 3883441 - 3883923 | 18293.2 |
| threonine/homoserine efflux transporter rhta | SAMN06296052_1169 | Not Available | Negative | 3884169 - 3885077 | 32427.3 |
| anti-sigma b factor antagonist/stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN06296052_11610 | Not Available | Negative | 3885439 - 3885798 | 12963.6 |
| two component transcriptional regulator, luxr family | SAMN06296052_11611 | Not Available | Positive | 3886321 - 3886980 | 24003.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
