Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdenum cofactor cytidylyltransferaseSAMN06296052_115135Not AvailableNegative3865139 - 386573521089.7
xanthine and co dehydrogenase maturation factor, xdhc/coxf familySAMN06296052_115136Not AvailableNegative3866140 - 386729742075.1
mannan endo-1,4-beta-mannosidaseSAMN06296052_115137Not AvailableNegative3867504 - 386864643301.1
phosphoribosyl 1,2-cyclic phosphodiesteraseSAMN06296052_115138Not AvailableNegative3868802 - 386964431362.7
hypothetical proteinSAMN06296052_115139Not AvailableNegative3869779 - 38700429883.79
atp-dependent helicase hrpbSAMN06296052_115140Not AvailablePositive3870289 - 387283593286.9
protein of unknown functionSAMN06296052_115141Not AvailableNegative3872844 - 387360228736.4
hypothetical proteinSAMN06296052_115142Not AvailablePositive3873847 - 387432618146.7
aryl sulfotransferaseSAMN06296052_115143Not AvailableNegative3874335 - 387522535105.9
nitroreductaseSAMN06296052_1161Not AvailableNegative3876309 - 387689622125.8

Displaying genes 3381 – 3390 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.