Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor cytidylyltransferase | SAMN06296052_115135 | Not Available | Negative | 3865139 - 3865735 | 21089.7 |
| xanthine and co dehydrogenase maturation factor, xdhc/coxf family | SAMN06296052_115136 | Not Available | Negative | 3866140 - 3867297 | 42075.1 |
| mannan endo-1,4-beta-mannosidase | SAMN06296052_115137 | Not Available | Negative | 3867504 - 3868646 | 43301.1 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN06296052_115138 | Not Available | Negative | 3868802 - 3869644 | 31362.7 |
| hypothetical protein | SAMN06296052_115139 | Not Available | Negative | 3869779 - 3870042 | 9883.79 |
| atp-dependent helicase hrpb | SAMN06296052_115140 | Not Available | Positive | 3870289 - 3872835 | 93286.9 |
| protein of unknown function | SAMN06296052_115141 | Not Available | Negative | 3872844 - 3873602 | 28736.4 |
| hypothetical protein | SAMN06296052_115142 | Not Available | Positive | 3873847 - 3874326 | 18146.7 |
| aryl sulfotransferase | SAMN06296052_115143 | Not Available | Negative | 3874335 - 3875225 | 35105.9 |
| nitroreductase | SAMN06296052_1161 | Not Available | Negative | 3876309 - 3876896 | 22125.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
