Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-degrading monooxygenase hmoa | SAMN06296052_115115 | Not Available | Negative | 3843473 - 3843769 | 11233.5 |
| pas domain s-box-containing protein | SAMN06296052_115116 | Not Available | Negative | 3843923 - 3845722 | 66955.2 |
| alpha-glucosidase | SAMN06296052_115117 | Not Available | Positive | 3845936 - 3847936 | 76206.0 |
| gaf domain-containing protein | SAMN06296052_115118 | Not Available | Negative | 3848073 - 3848558 | 17576.4 |
| formate/nitrite transporter foca, fnt family | SAMN06296052_115119 | Not Available | Negative | 3848891 - 3849715 | 29917.3 |
| hypothetical protein | SAMN06296052_115120 | Not Available | Negative | 3849914 - 3850537 | 23280.6 |
| hypothetical protein | SAMN06296052_115121 | Not Available | Positive | 3851241 - 3851948 | 25354.9 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN06296052_115122 | Not Available | Negative | 3852195 - 3854414 | 81260.0 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN06296052_115123 | Not Available | Negative | 3854411 - 3855406 | 35660.7 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN06296052_115124 | Not Available | Negative | 3855403 - 3855930 | 19159.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
