Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_115105 | Not Available | Positive | 3827080 - 3827415 | 11701.0 |
| excinuclease abc subunit a | SAMN06296052_115106 | Not Available | Negative | 3827952 - 3830531 | 94234.6 |
| hypothetical protein | SAMN06296052_115107 | Not Available | Positive | 3830728 - 3831150 | 16530.4 |
| predicted esterase | SAMN06296052_115108 | Not Available | Negative | 3831214 - 3831966 | 27445.2 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN06296052_115109 | Not Available | Positive | 3832259 - 3833818 | 58359.4 |
| maltose alpha-d-glucosyltransferase/ alpha-amylase | SAMN06296052_115110 | Not Available | Positive | 3834092 - 3835753 | 64886.0 |
| protein of unknown function | SAMN06296052_115111 | Not Available | Negative | 3835874 - 3836710 | 31022.4 |
| hypothetical protein | SAMN06296052_115112 | Not Available | Negative | 3837118 - 3837525 | 15563.8 |
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN06296052_115113 | Not Available | Negative | 3837696 - 3841799 | 154789.0 |
| gaf domain-containing protein | SAMN06296052_115114 | Not Available | Negative | 3841839 - 3843377 | 57498.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
