Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN06296052_101263 | Not Available | Negative | 297367 - 297693 | 11689.0 |
| dna polymerase iii, alpha subunit | SAMN06296052_101264 | Not Available | Negative | 298177 - 301800 | 136667.0 |
| predicted arabinose efflux permease, mfs family | SAMN06296052_101265 | Not Available | Positive | 302063 - 303391 | 47626.6 |
| membrane-bound lytic murein transglycosylase d | SAMN06296052_101266 | Not Available | Negative | 303465 - 305816 | 86227.2 |
| predicted o-methyltransferase yrrm | SAMN06296052_101267 | Not Available | Negative | 306126 - 306770 | 24464.3 |
| predicted zn-dependent peptidase | SAMN06296052_101268 | Not Available | Negative | 306869 - 308101 | 46519.2 |
| hypothetical protein | SAMN06296052_101269 | Not Available | Negative | 308242 - 308649 | 15005.8 |
| hypothetical protein | SAMN06296052_101270 | Not Available | Negative | 308716 - 309522 | 29639.1 |
| heptosyltransferase-2 | SAMN06296052_101271 | Not Available | Positive | 309703 - 310704 | 37751.7 |
| adenylyltransferase and sulfurtransferase | SAMN06296052_101272 | Not Available | Negative | 311023 - 312090 | 38598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
