Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dissimilatory nitrite reductase (no-forming), copper type apoprotein | SAMN06296052_11525 | Not Available | Positive | 3733034 - 3734512 | 52839.1 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN06296052_11526 | Not Available | Positive | 3734672 - 3735454 | 29274.8 |
| protein sco1/2 | SAMN06296052_11527 | Not Available | Positive | 3735489 - 3736136 | 23814.6 |
| anaphase-promoting complex subunit 5 | SAMN06296052_11528 | Not Available | Negative | 3736285 - 3738210 | 72319.4 |
| protein of unknown function | SAMN06296052_11529 | Not Available | Negative | 3738207 - 3738671 | 17721.5 |
| alanine or glycine:cation symporter, agcs family | SAMN06296052_11530 | Not Available | Positive | 3739266 - 3740720 | 51829.6 |
| hypothetical protein | SAMN06296052_11531 | Not Available | Positive | 3740917 - 3741351 | 16001.2 |
| glycogen recognition site of amp-activated protein kinase | SAMN06296052_11532 | Not Available | Negative | 3741507 - 3741797 | 10900.7 |
| peptidase family m1 | SAMN06296052_11533 | Not Available | Negative | 3742225 - 3745851 | 136054.0 |
| abc-type multidrug transport system, atpase component | SAMN06296052_11534 | Not Available | Negative | 3745848 - 3746750 | 33220.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
