Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN06296052_114169 | Not Available | Negative | 3697204 - 3698298 | 41185.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06296052_114170 | Not Available | Positive | 3698379 - 3699014 | 23665.0 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN06296052_114171 | Not Available | Positive | 3699038 - 3699745 | 25816.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_114172 | Not Available | Positive | 3699851 - 3703792 | 144245.0 |
| hypothetical protein | SAMN06296052_114173 | Not Available | Positive | 3703846 - 3704964 | 39783.6 |
| predicted zn-dependent peptidase | SAMN06296052_114174 | Not Available | Positive | 3704982 - 3706271 | 49684.7 |
| hypothetical protein | SAMN06296052_1151 | Not Available | Positive | 3707686 - 3707904 | 7650.88 |
| pap2 superfamily protein | SAMN06296052_1152 | Not Available | Negative | 3708048 - 3709448 | 52445.1 |
| short-chain dehydrogenase | SAMN06296052_1153 | Not Available | Positive | 3709797 - 3710585 | 28480.5 |
| hypothetical protein | SAMN06296052_1154 | Not Available | Negative | 3710973 - 3711536 | 21564.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
