Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase subunit ruva | SAMN06296052_114159 | Not Available | Positive | 3679554 - 3680144 | 21332.0 |
| cell surface protein spra | SAMN06296052_114160 | Not Available | Positive | 3680160 - 3687326 | 272157.0 |
| glycine cleavage system h protein | SAMN06296052_114161 | Not Available | Positive | 3687387 - 3687767 | 13962.2 |
| vanz like family protein | SAMN06296052_114162 | Not Available | Positive | 3687789 - 3688166 | 14361.9 |
| zn-dependent amino- or carboxypeptidase, m28 family | SAMN06296052_114163 | Not Available | Positive | 3688235 - 3689503 | 46840.9 |
| tigr00255 family protein | SAMN06296052_114164 | Not Available | Negative | 3689583 - 3690461 | 33739.3 |
| hypothetical protein | SAMN06296052_114165 | Not Available | Positive | 3690850 - 3691080 | 8911.97 |
| sulfate permease, sulp family | SAMN06296052_114166 | Not Available | Positive | 3691212 - 3692756 | 55279.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN06296052_114167 | Not Available | Negative | 3692844 - 3693992 | 43247.2 |
| hypothetical protein | SAMN06296052_114168 | Not Available | Negative | 3694002 - 3697199 | 120906.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
