Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN06296052_114149 | Not Available | Positive | 3667391 - 3667840 | 16414.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN06296052_114150 | Not Available | Positive | 3667975 - 3668982 | 37038.3 |
| tetratricopeptide repeat-containing protein | SAMN06296052_114151 | Not Available | Positive | 3668927 - 3670747 | 68949.1 |
| protein of unknown function | SAMN06296052_114152 | Not Available | Positive | 3670740 - 3671492 | 27660.2 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN06296052_114153 | Not Available | Positive | 3671570 - 3672805 | 45777.3 |
| sec-independent protein translocase protein tata | SAMN06296052_114154 | Not Available | Positive | 3673644 - 3673859 | 7726.61 |
| sec-independent protein translocase protein tata | SAMN06296052_114155 | Not Available | Positive | 3673893 - 3674105 | 7785.51 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN06296052_114156 | Not Available | Positive | 3674107 - 3675543 | 52262.1 |
| membrane-bound lytic murein transglycosylase d | SAMN06296052_114157 | Not Available | Positive | 3675552 - 3677051 | 56401.8 |
| allosteric nadp-dependent malic enzyme | SAMN06296052_114158 | Not Available | Positive | 3677280 - 3679553 | 83368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
