Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06296052_114139 | Not Available | Negative | 3656511 - 3657650 | 43434.1 |
| ribosome maturation factor rimp | SAMN06296052_114140 | Not Available | Positive | 3658017 - 3658460 | 16199.5 |
| nusa antitermination factor | SAMN06296052_114141 | Not Available | Positive | 3658468 - 3659724 | 48367.5 |
| bacterial translation initiation factor 2 (bif-2) | SAMN06296052_114142 | Not Available | Positive | 3659845 - 3662874 | 108710.0 |
| hypothetical protein | SAMN06296052_114143 | Not Available | Positive | 3662881 - 3663021 | 5328.79 |
| hypothetical protein | SAMN06296052_114144 | Not Available | Negative | 3663018 - 3663356 | 12864.7 |
| protein of unknown function | SAMN06296052_114145 | Not Available | Negative | 3663449 - 3664423 | 36809.9 |
| large conductance mechanosensitive channel | SAMN06296052_114146 | Not Available | Negative | 3664438 - 3664887 | 16195.0 |
| enoyl-coa hydratase | SAMN06296052_114147 | Not Available | Positive | 3665058 - 3665840 | 27776.6 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06296052_114148 | Not Available | Positive | 3665876 - 3667372 | 56171.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
