Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | SAMN06296052_114129 | Not Available | Positive | 3645939 - 3646832 | 32696.5 |
| hypothetical protein | SAMN06296052_114130 | Not Available | Negative | 3647068 - 3647289 | 8480.86 |
| endonuclease-3 | SAMN06296052_114131 | Not Available | Negative | 3647703 - 3648410 | 27268.1 |
| metallo-beta-lactamase superfamily protein | SAMN06296052_114132 | Not Available | Positive | 3648641 - 3649336 | 26497.9 |
| outer membrane protein ompa | SAMN06296052_114133 | Not Available | Negative | 3649417 - 3650124 | 24892.3 |
| outer membrane protein ompa | SAMN06296052_114134 | Not Available | Negative | 3650436 - 3651251 | 28653.0 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN06296052_114135 | Not Available | Negative | 3651416 - 3652321 | 33424.4 |
| fructose-bisphosphate aldolase | SAMN06296052_114136 | Not Available | Negative | 3652481 - 3653563 | 39551.2 |
| peptidase family m28 | SAMN06296052_114137 | Not Available | Negative | 3653919 - 3654923 | 36929.7 |
| cysteinyl-trna synthetase | SAMN06296052_114138 | Not Available | Negative | 3654913 - 3656406 | 57015.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
