Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, fe-mn family | SAMN06296052_114119 | Not Available | Positive | 3637364 - 3637975 | 22725.3 |
| hypothetical protein | SAMN06296052_114120 | Not Available | Negative | 3637954 - 3638136 | 7288.03 |
| thiol:disulfide interchange protein dsbd | SAMN06296052_114121 | Not Available | Negative | 3638087 - 3640279 | 80292.9 |
| hypothetical protein | SAMN06296052_114122 | Not Available | Positive | 3640836 - 3641147 | 12243.2 |
| hypothetical protein | SAMN06296052_114123 | Not Available | Negative | 3641049 - 3641291 | 8640.74 |
| hemolysin, contains cbs domains | SAMN06296052_114124 | Not Available | Positive | 3641361 - 3642674 | 48924.6 |
| hemerythrin hhe cation binding domain-containing protein | SAMN06296052_114125 | Not Available | Positive | 3642684 - 3643139 | 17334.9 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN06296052_114126 | Not Available | Negative | 3643140 - 3643658 | 18436.3 |
| radical sam superfamily enzyme, moaa/nifb/pqqe/skfb family | SAMN06296052_114127 | Not Available | Negative | 3643761 - 3644750 | 37872.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_114128 | Not Available | Positive | 3645226 - 3645822 | 22081.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
