Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd domain-containing protein | SAMN06296052_11352 | Not Available | Negative | 3408988 - 3410448 | 53381.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_11353 | Not Available | Negative | 3410467 - 3413595 | 112864.0 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06296052_11354 | Not Available | Negative | 3414029 - 3416434 | 90881.5 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN06296052_11355 | Not Available | Negative | 3416554 - 3418227 | 61231.5 |
| susd family protein | SAMN06296052_11356 | Not Available | Negative | 3418334 - 3419839 | 55335.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_11357 | Not Available | Negative | 3419865 - 3422879 | 110183.0 |
| hypothetical protein | SAMN06296052_11358 | Not Available | Negative | 3423716 - 3424534 | 30755.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_11359 | Not Available | Positive | 3424712 - 3426676 | 73946.3 |
| tm2 domain-containing protein | SAMN06296052_11360 | Not Available | Negative | 3426731 - 3427078 | 13213.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06296052_11361 | Not Available | Positive | 3427489 - 3428955 | 52446.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
