Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11342 | Not Available | Positive | 3398608 - 3398721 | 4474.76 |
| ssu ribosomal protein s21p | SAMN06296052_11343 | Not Available | Positive | 3398758 - 3398952 | 7754.45 |
| integrase/recombinase xerc | SAMN06296052_11344 | Not Available | Positive | 3399023 - 3399901 | 33786.8 |
| putative sigma-54 modulation protein | SAMN06296052_11345 | Not Available | Positive | 3399926 - 3400228 | 11481.5 |
| methionine adenosyltransferase | SAMN06296052_11346 | Not Available | Negative | 3400365 - 3401669 | 47701.6 |
| pap2 superfamily protein | SAMN06296052_11347 | Not Available | Positive | 3401940 - 3402743 | 29020.4 |
| pap2 superfamily protein | SAMN06296052_11348 | Not Available | Positive | 3402750 - 3403556 | 28930.6 |
| susd family protein | SAMN06296052_11349 | Not Available | Negative | 3403610 - 3405130 | 56663.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_11350 | Not Available | Negative | 3405130 - 3408273 | 114427.0 |
| hypothetical protein | SAMN06296052_11351 | Not Available | Negative | 3408822 - 3408941 | 4570.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
