Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11332 | Not Available | Negative | 3388722 - 3388835 | 4325.53 |
| hypothetical protein | SAMN06296052_11333 | Not Available | Negative | 3388920 - 3390602 | 60558.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_11334 | Not Available | Negative | 3390586 - 3391164 | 22203.0 |
| shikimate dehydrogenase | SAMN06296052_11335 | Not Available | Negative | 3391420 - 3392154 | 27285.6 |
| putative membrane protein | SAMN06296052_11336 | Not Available | Negative | 3392181 - 3393074 | 32315.8 |
| phosphosulfolactate synthase | SAMN06296052_11337 | Not Available | Negative | 3393229 - 3394002 | 29149.1 |
| tetratricopeptide repeat-containing protein | SAMN06296052_11338 | Not Available | Negative | 3394009 - 3395409 | 54186.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN06296052_11339 | Not Available | Negative | 3395478 - 3396467 | 36693.9 |
| tyrosine-protein phosphatase ywqe | SAMN06296052_11340 | Not Available | Negative | 3396493 - 3397239 | 28180.9 |
| acyl-coa dehydrogenase | SAMN06296052_11341 | Not Available | Positive | 3397469 - 3398608 | 41279.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
