Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repeat domain-containing protein | SAMN06296052_1131 | Not Available | Negative | 3341281 - 3342815 | 56935.1 |
| hypothetical protein | SAMN06296052_1132 | Not Available | Positive | 3343003 - 3343203 | 7255.8 |
| bnr/asp-box repeat-containing protein | SAMN06296052_1133 | Not Available | Negative | 3343117 - 3345609 | 88269.2 |
| mannan endo-1,4-beta-mannosidase | SAMN06296052_1134 | Not Available | Negative | 3345704 - 3347380 | 63049.5 |
| ipt/tig domain-containing protein | SAMN06296052_1135 | Not Available | Negative | 3347545 - 3349596 | 72746.2 |
| hypothetical protein | SAMN06296052_1136 | Not Available | Negative | 3349625 - 3350791 | 42573.4 |
| starch-binding associating with outer membrane | SAMN06296052_1137 | Not Available | Negative | 3350826 - 3352487 | 62884.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_1138 | Not Available | Negative | 3352506 - 3355712 | 116857.0 |
| hypothetical protein | SAMN06296052_1139 | Not Available | Negative | 3356881 - 3357123 | 9133.94 |
| lysophospholipase l1 | SAMN06296052_11310 | Not Available | Negative | 3357295 - 3357954 | 24321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
