Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase, ybgc/ybaw family | SAMN06296052_112158 | Not Available | Positive | 3322523 - 3322951 | 15958.4 |
| hypothetical protein | SAMN06296052_112159 | Not Available | Negative | 3323085 - 3323537 | 17178.5 |
| hypothetical protein | SAMN06296052_112160 | Not Available | Negative | 3323636 - 3324091 | 18033.5 |
| hypothetical protein | SAMN06296052_112161 | Not Available | Positive | 3324256 - 3325026 | 28709.9 |
| hypothetical protein | SAMN06296052_112162 | Not Available | Negative | 3325217 - 3326437 | 46142.3 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN06296052_112163 | Not Available | Positive | 3326804 - 3327877 | 40474.5 |
| membrane protein | SAMN06296052_112164 | Not Available | Negative | 3327983 - 3328948 | 34963.9 |
| hypothetical protein | SAMN06296052_112165 | Not Available | Positive | 3329106 - 3329849 | 29002.2 |
| protein of unknown function | SAMN06296052_112166 | Not Available | Negative | 3330029 - 3331441 | 52109.9 |
| thioredoxin | SAMN06296052_112167 | Not Available | Negative | 3331580 - 3331897 | 12073.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
