Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | SAMN06296052_112138 | Not Available | Positive | 3300333 - 3302036 | 63197.5 |
| polygalacturonase | SAMN06296052_112139 | Not Available | Positive | 3302049 - 3303806 | 63856.9 |
| hypothetical protein | SAMN06296052_112140 | Not Available | Positive | 3303830 - 3303919 | 3583.38 |
| pectate lyase, pela/pel-15e family | SAMN06296052_112141 | Not Available | Positive | 3303963 - 3305099 | 42389.7 |
| lysophospholipase l1 | SAMN06296052_112142 | Not Available | Positive | 3305111 - 3305881 | 29248.0 |
| lysophospholipase l1 | SAMN06296052_112143 | Not Available | Positive | 3306038 - 3306856 | 30818.8 |
| alpha-l-fucosidase 2 | SAMN06296052_112144 | Not Available | Positive | 3306937 - 3309414 | 91977.4 |
| hypothetical protein | SAMN06296052_112145 | Not Available | Positive | 3309436 - 3310848 | 50073.1 |
| abhydrolase family protein | SAMN06296052_112146 | Not Available | Positive | 3311086 - 3312315 | 46490.7 |
| catechol 2,3-dioxygenase | SAMN06296052_112147 | Not Available | Positive | 3312349 - 3312753 | 15127.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
