Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 5-dehydrogenase | SAMN06296052_112128 | Not Available | Negative | 3285278 - 3286066 | 28436.4 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN06296052_112129 | Not Available | Negative | 3286072 - 3286911 | 31548.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_112130 | Not Available | Positive | 3287376 - 3290633 | 120520.0 |
| starch-binding associating with outer membrane | SAMN06296052_112131 | Not Available | Positive | 3290653 - 3292458 | 67097.8 |
| protein of unknown function | SAMN06296052_112132 | Not Available | Positive | 3292497 - 3294101 | 57867.6 |
| protein of unknown function | SAMN06296052_112133 | Not Available | Positive | 3294223 - 3295533 | 48773.8 |
| hypothetical protein | SAMN06296052_112134 | Not Available | Positive | 3295580 - 3296962 | 50394.1 |
| pectinesterase | SAMN06296052_112135 | Not Available | Positive | 3296959 - 3297897 | 34895.1 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN06296052_112136 | Not Available | Positive | 3298048 - 3299289 | 47121.8 |
| pectinesterase | SAMN06296052_112137 | Not Available | Positive | 3299302 - 3300291 | 36817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
