Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_112108 | Not Available | Negative | 3262712 - 3266476 | 133230.0 |
| porphobilinogen synthase | SAMN06296052_112109 | Not Available | Negative | 3266672 - 3267643 | 35719.7 |
| ornithine--oxo-acid transaminase | SAMN06296052_112110 | Not Available | Negative | 3267830 - 3269071 | 45519.8 |
| lsu ribosomal protein l28p | SAMN06296052_112111 | Not Available | Positive | 3269642 - 3269881 | 9024.02 |
| large subunit ribosomal protein l33 | SAMN06296052_112112 | Not Available | Positive | 3270250 - 3270438 | 7185.94 |
| protein of unknown function | SAMN06296052_112113 | Not Available | Positive | 3270441 - 3270593 | 5570.95 |
| signal recognition particle-docking protein ftsy | SAMN06296052_112114 | Not Available | Positive | 3270704 - 3271663 | 34601.8 |
| hypothetical protein | SAMN06296052_112115 | Not Available | Positive | 3271671 - 3272207 | 19654.3 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN06296052_112116 | Not Available | Positive | 3272211 - 3273539 | 50645.1 |
| ph domain-containing protein | SAMN06296052_112117 | Not Available | Negative | 3273688 - 3274068 | 14488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
