Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+) dicitrate transport protein | SAMN06296052_11298 | Not Available | Negative | 3249521 - 3251932 | 89564.0 |
| vitamin k-dependent gamma-carboxylase | SAMN06296052_11299 | Not Available | Negative | 3251937 - 3253313 | 53107.9 |
| hypothetical protein | SAMN06296052_112100 | Not Available | Negative | 3253404 - 3254480 | 37840.1 |
| protein of unknown function | SAMN06296052_112101 | Not Available | Negative | 3254617 - 3255717 | 39766.9 |
| hypothetical protein | SAMN06296052_112102 | Not Available | Negative | 3255805 - 3255984 | 6944.75 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN06296052_112103 | Not Available | Positive | 3255992 - 3257644 | 61309.8 |
| homogentisate 1,2-dioxygenase | SAMN06296052_112104 | Not Available | Positive | 3257729 - 3258901 | 44758.1 |
| hypothetical protein | SAMN06296052_112105 | Not Available | Positive | 3259019 - 3259546 | 19672.6 |
| co-chaperonin groes (hsp10) | SAMN06296052_112106 | Not Available | Positive | 3259548 - 3259940 | 14973.0 |
| carbohydrate family 9 binding domain-like | SAMN06296052_112107 | Not Available | Positive | 3260129 - 3262636 | 95599.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
