Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06296052_11288 | Not Available | Negative | 3239093 - 3239314 | 8655.83 |
| protein of unknown function | SAMN06296052_11289 | Not Available | Negative | 3239623 - 3240936 | 51554.1 |
| atp-binding cassette protein, chvd family | SAMN06296052_11290 | Not Available | Positive | 3241294 - 3242964 | 62862.7 |
| hypothetical protein | SAMN06296052_11291 | Not Available | Positive | 3243396 - 3243491 | 3395.19 |
| cubico group peptidase, beta-lactamase class c family | SAMN06296052_11292 | Not Available | Negative | 3243568 - 3245145 | 58738.6 |
| hypothetical protein | SAMN06296052_11293 | Not Available | Negative | 3245246 - 3246220 | 37697.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN06296052_11294 | Not Available | Positive | 3246356 - 3246931 | 22036.2 |
| putative collagen-binding domain of a collagenase | SAMN06296052_11295 | Not Available | Positive | 3246949 - 3248319 | 51960.5 |
| peptide deformylase | SAMN06296052_11296 | Not Available | Negative | 3248396 - 3248965 | 21762.0 |
| putative holliday junction resolvase | SAMN06296052_11297 | Not Available | Negative | 3248962 - 3249378 | 15213.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
