Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN06296052_11278 | Not Available | Positive | 3227486 - 3228055 | 20925.7 |
| excinuclease abc subunit a | SAMN06296052_11279 | Not Available | Negative | 3228098 - 3231013 | 108119.0 |
| putative membrane protein | SAMN06296052_11280 | Not Available | Negative | 3231167 - 3231547 | 14521.0 |
| glycosidase | SAMN06296052_11281 | Not Available | Negative | 3231619 - 3232995 | 51757.1 |
| transcriptional regulator, tetr family | SAMN06296052_11282 | Not Available | Negative | 3233066 - 3233635 | 21329.7 |
| hypothetical protein | SAMN06296052_11283 | Not Available | Negative | 3233765 - 3234628 | 32221.6 |
| putative abc transport system permease protein | SAMN06296052_11284 | Not Available | Negative | 3234756 - 3236003 | 45886.2 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN06296052_11285 | Not Available | Positive | 3236197 - 3237243 | 39731.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN06296052_11286 | Not Available | Positive | 3237411 - 3238082 | 24771.8 |
| iron complex transport system atp-binding protein | SAMN06296052_11287 | Not Available | Negative | 3238274 - 3238978 | 26295.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
