Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3170757 - 3170834 | Not Available |
| protein of unknown function | SAMN06296052_11229 | Not Available | Positive | 3171024 - 3173540 | 93911.9 |
| mscs family membrane protein | SAMN06296052_11230 | Not Available | Negative | 3173905 - 3175077 | 44872.0 |
| glutamate dehydrogenase/leucine dehydrogenase | SAMN06296052_11231 | Not Available | Negative | 3175087 - 3176313 | 44948.6 |
| anhydro-n-acetylmuramic acid kinase | SAMN06296052_11232 | Not Available | Negative | 3176384 - 3177457 | 39087.6 |
| transcriptional regulator, arsr family | SAMN06296052_11233 | Not Available | Positive | 3177589 - 3177885 | 10929.7 |
| glutamyl-trna reductase | SAMN06296052_11234 | Not Available | Negative | 3178023 - 3179297 | 47781.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06296052_11235 | Not Available | Positive | 3179411 - 3180586 | 44402.9 |
| hypothetical protein | SAMN06296052_11236 | Not Available | Positive | 3180681 - 3181610 | 35192.3 |
| transporter, nhac family | SAMN06296052_11237 | Not Available | Negative | 3181668 - 3183665 | 72535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
