Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN06296052_11218 | Not Available | Negative | 3162069 - 3163853 | 67208.9 |
| leucine dehydrogenase | SAMN06296052_11219 | Not Available | Positive | 3164003 - 3165103 | 39863.8 |
| nusb antitermination factor | SAMN06296052_11220 | Not Available | Positive | 3165313 - 3166485 | 45711.8 |
| gas vesicle protein | SAMN06296052_11221 | Not Available | Positive | 3166577 - 3166882 | 11057.2 |
| isocitrate dehydrogenase (nad+) | SAMN06296052_11222 | Not Available | Positive | 3166886 - 3167884 | 35760.4 |
| protein of unknown function | SAMN06296052_11223 | Not Available | Positive | 3167927 - 3168454 | 18006.1 |
| preprotein translocase subunit yajc | SAMN06296052_11224 | Not Available | Positive | 3168487 - 3168792 | 11655.7 |
| hypothetical protein | SAMN06296052_11225 | Not Available | Positive | 3168798 - 3169802 | 37925.8 |
| dephospho-coa kinase | SAMN06296052_11226 | Not Available | Positive | 3169805 - 3170404 | 22724.3 |
| Trna-val | Not Available | Not Available | Positive | 3170589 - 3170666 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
