Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN06296052_1128 | Not Available | Positive | 3153986 - 3155155 | 43222.5 |
| protein of unknown function | SAMN06296052_1129 | Not Available | Positive | 3155332 - 3156075 | 28764.4 |
| protein of unknown function | SAMN06296052_11210 | Not Available | Negative | 3156173 - 3156664 | 17963.2 |
| hypothetical protein | SAMN06296052_11211 | Not Available | Positive | 3156742 - 3156861 | 4238.07 |
| gaf domain-containing protein | SAMN06296052_11212 | Not Available | Positive | 3156966 - 3157520 | 20375.6 |
| trna pseudouridine38-40 synthase | SAMN06296052_11213 | Not Available | Positive | 3157598 - 3158350 | 28462.8 |
| atp-binding cassette, subfamily b | SAMN06296052_11214 | Not Available | Positive | 3158510 - 3160279 | 67423.1 |
| dna gyrase inhibitor gyri | SAMN06296052_11215 | Not Available | Positive | 3160276 - 3160794 | 18973.7 |
| transcriptional regulator, tetr family | SAMN06296052_11216 | Not Available | Positive | 3160882 - 3161490 | 23472.2 |
| hypothetical protein | SAMN06296052_11217 | Not Available | Negative | 3161519 - 3161932 | 15626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
