Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN06296052_111169 | Not Available | Negative | 3142140 - 3143558 | 52079.5 |
| threonine dehydrogenase | SAMN06296052_111170 | Not Available | Negative | 3143834 - 3144955 | 40770.4 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN06296052_111171 | Not Available | Negative | 3144952 - 3146775 | 69949.2 |
| transposase | SAMN06296052_1121 | Not Available | Negative | 3147739 - 3148050 | 11996.4 |
| Trna-phe | Not Available | Not Available | Positive | 3148291 - 3148366 | Not Available |
| 4fe-4s dicluster domain-containing protein | SAMN06296052_1123 | Not Available | Positive | 3148544 - 3149923 | 51255.1 |
| cysteine-rich domain-containing protein | SAMN06296052_1124 | Not Available | Positive | 3150089 - 3150874 | 28739.3 |
| hypothetical protein | SAMN06296052_1125 | Not Available | Positive | 3151020 - 3151502 | 18247.6 |
| wd40-like beta propeller repeat | SAMN06296052_1126 | Not Available | Positive | 3151530 - 3153479 | 71960.1 |
| hypothetical protein | SAMN06296052_1127 | Not Available | Negative | 3153584 - 3153826 | 8980.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
