Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN06296052_101213 | Not Available | Positive | 227484 - 229058 | 58191.0 |
| regulator of rnase e activity rraa | SAMN06296052_101214 | Not Available | Positive | 229291 - 230241 | 35660.8 |
| galactonate dehydratase | SAMN06296052_101215 | Not Available | Positive | 230278 - 231561 | 46931.5 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN06296052_101216 | Not Available | Positive | 231863 - 233362 | 55825.7 |
| regulator of rnase e activity rraa | SAMN06296052_101217 | Not Available | Positive | 233528 - 234460 | 34295.1 |
| regulator of rnase e activity rraa | SAMN06296052_101218 | Not Available | Positive | 234545 - 235477 | 34566.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN06296052_101219 | Not Available | Positive | 235525 - 237045 | 56231.9 |
| bile acid:na+ symporter, bass family | SAMN06296052_101220 | Not Available | Positive | 237248 - 238378 | 40025.7 |
| protein of unknown function | SAMN06296052_101221 | Not Available | Positive | 238483 - 238899 | 15251.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_101222 | Not Available | Positive | 239194 - 242373 | 115028.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
