Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythromycin esterase homolog | SAMN06296052_111139 | Not Available | Positive | 3111700 - 3113004 | 49507.5 |
| hypothetical protein | SAMN06296052_111140 | Not Available | Negative | 3113306 - 3113908 | 23629.8 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN06296052_111141 | Not Available | Negative | 3114685 - 3115386 | 25735.1 |
| nitroreductase | SAMN06296052_111142 | Not Available | Negative | 3115459 - 3116088 | 23681.4 |
| transcriptional regulator, hxlr family | SAMN06296052_111143 | Not Available | Positive | 3116237 - 3116623 | 14642.8 |
| signal transduction histidine kinase | SAMN06296052_111144 | Not Available | Negative | 3116715 - 3118082 | 51311.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06296052_111145 | Not Available | Negative | 3118066 - 3118758 | 26451.0 |
| hypothetical protein | SAMN06296052_111146 | Not Available | Negative | 3118782 - 3119798 | 36812.1 |
| hypothetical protein | SAMN06296052_111147 | Not Available | Negative | 3119823 - 3120908 | 36148.7 |
| sigma-b regulation protein rsbq | SAMN06296052_111148 | Not Available | Positive | 3121469 - 3122257 | 28610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
