Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_111109 | Not Available | Negative | 3079646 - 3080443 | 28256.7 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN06296052_111110 | Not Available | Negative | 3080529 - 3081176 | 25098.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06296052_111111 | Not Available | Negative | 3081519 - 3082874 | 49435.2 |
| predicted zn-dependent peptidase | SAMN06296052_111112 | Not Available | Positive | 3083287 - 3084750 | 54977.9 |
| predicted zn-dependent peptidase | SAMN06296052_111113 | Not Available | Positive | 3084761 - 3086164 | 51434.8 |
| hypothetical protein | SAMN06296052_111114 | Not Available | Positive | 3086217 - 3086333 | 4656.8 |
| hypothetical protein | SAMN06296052_111115 | Not Available | Negative | 3087093 - 3087752 | 24495.7 |
| nadh dehydrogenase subunit n | SAMN06296052_111116 | Not Available | Negative | 3087853 - 3089313 | 53502.2 |
| nadh dehydrogenase subunit m | SAMN06296052_111117 | Not Available | Negative | 3089300 - 3090892 | 58956.2 |
| nadh dehydrogenase subunit l | SAMN06296052_111118 | Not Available | Negative | 3090889 - 3092775 | 68465.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
