Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-paratose 2-epimerase | SAMN06296052_11179 | Not Available | Negative | 3047663 - 3048724 | 40214.4 |
| uncharacterised nucleotidyltransferase | SAMN06296052_11180 | Not Available | Positive | 3049533 - 3050288 | 29464.4 |
| predicted phosphoesterase | SAMN06296052_11181 | Not Available | Positive | 3050252 - 3051034 | 28506.4 |
| acyl carrier protein | SAMN06296052_11182 | Not Available | Negative | 3051146 - 3051415 | 9634.45 |
| heavy metal efflux pump, czca family/hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN06296052_11183 | Not Available | Negative | 3051561 - 3054731 | 114685.0 |
| rnd family efflux transporter, mfp subunit | SAMN06296052_11184 | Not Available | Negative | 3054774 - 3055826 | 37650.6 |
| outer membrane protein tolc | SAMN06296052_11185 | Not Available | Negative | 3055848 - 3057197 | 50761.6 |
| marr family protein | SAMN06296052_11186 | Not Available | Negative | 3057269 - 3057733 | 17902.7 |
| starch phosphorylase | SAMN06296052_11187 | Not Available | Positive | 3058029 - 3059684 | 63696.2 |
| dipeptidase d | SAMN06296052_11188 | Not Available | Negative | 3059758 - 3061221 | 52604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
