Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06296052_101204Not AvailablePositive216200 - 2163947789.75
hypothetical proteinSAMN06296052_101205Not AvailablePositive216510 - 2167468679.64
hypothetical proteinSAMN06296052_101206Not AvailablePositive216943 - 21726012279.7
2-dehydro-3-deoxy-d-arabinonate dehydrataseSAMN06296052_101207Not AvailablePositive217443 - 21827931276.2
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive218230 - 21831518.01
nadp-dependent aldehyde dehydrogenaseSAMN06296052_101208Not AvailablePositive218293 - 21990057879.3
dihydroxyacid dehydrataseSAMN06296052_101209Not AvailablePositive220048 - 22176962503.5
rna polymerase sigma-70 factor, ecf subfamilySAMN06296052_101210Not AvailableNegative222046 - 22263622351.8
fecr family proteinSAMN06296052_101211Not AvailablePositive222825 - 22385338708.7
tonb-linked outer membrane protein, susc/raga familySAMN06296052_101212Not AvailablePositive224004 - 227462126190.0

Displaying genes 261 – 270 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.