Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_11159 | Not Available | Negative | 3023706 - 3025145 | 54623.2 |
| hypothetical protein | SAMN06296052_11160 | Not Available | Negative | 3025210 - 3026232 | 39227.6 |
| outer membrane protein, yaio family | SAMN06296052_11161 | Not Available | Negative | 3026232 - 3027476 | 47511.2 |
| response regulator receiver domain-containing protein | SAMN06296052_11162 | Not Available | Negative | 3027473 - 3027844 | 13595.8 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN06296052_11163 | Not Available | Negative | 3027886 - 3028281 | 14645.9 |
| xaa-pro aminopeptidase | SAMN06296052_11164 | Not Available | Positive | 3028590 - 3030365 | 66039.7 |
| hypothetical protein | SAMN06296052_11165 | Not Available | Negative | 3030459 - 3031739 | 50836.2 |
| dna polymerase-3 subunit epsilon | SAMN06296052_11166 | Not Available | Positive | 3032018 - 3032704 | 26315.7 |
| cbs domain-containing protein | SAMN06296052_11167 | Not Available | Positive | 3032701 - 3034608 | 73810.1 |
| 2'-5' rna ligase superfamily protein | SAMN06296052_11168 | Not Available | Positive | 3034611 - 3035294 | 26557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
