Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN06296052_11149 | Not Available | Negative | 3012091 - 3013332 | 46548.0 |
| putative abc transport system atp-binding protein | SAMN06296052_11150 | Not Available | Negative | 3013336 - 3014037 | 25642.1 |
| protein of unknown function | SAMN06296052_11151 | Not Available | Negative | 3014087 - 3014476 | 14065.1 |
| outer membrane protein tolc | SAMN06296052_11152 | Not Available | Negative | 3014509 - 3015981 | 55276.6 |
| hlyd family secretion protein | SAMN06296052_11153 | Not Available | Negative | 3016045 - 3017289 | 45997.2 |
| mfs transporter, sugar porter (sp) family | SAMN06296052_11154 | Not Available | Positive | 3017640 - 3018968 | 48747.9 |
| beta-glucuronidase | SAMN06296052_11155 | Not Available | Positive | 3019130 - 3020968 | 71457.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06296052_11156 | Not Available | Positive | 3021149 - 3021751 | 21195.8 |
| glycosyl hydrolase family 88 | SAMN06296052_11157 | Not Available | Negative | 3021824 - 3023062 | 45828.7 |
| hypothetical protein | SAMN06296052_11158 | Not Available | Negative | 3023090 - 3023500 | 14979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
