Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular exopolysaccharide family | SAMN06296052_11139 | Not Available | Negative | 2999145 - 3001517 | 89388.6 |
| polysaccharide export outer membrane protein | SAMN06296052_11140 | Not Available | Negative | 3001521 - 3002285 | 28628.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_11141 | Not Available | Negative | 3002639 - 3003814 | 43109.1 |
| polysaccharide deacetylase | SAMN06296052_11142 | Not Available | Positive | 3004118 - 3005137 | 39743.4 |
| methyltransferase domain-containing protein | SAMN06296052_11143 | Not Available | Negative | 3005143 - 3005760 | 23529.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06296052_11144 | Not Available | Negative | 3005993 - 3006838 | 32044.0 |
| hypothetical protein | SAMN06296052_11145 | Not Available | Negative | 3007665 - 3007883 | 8488.46 |
| pas domain s-box-containing protein | SAMN06296052_11146 | Not Available | Negative | 3008152 - 3009459 | 49583.2 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06296052_11147 | Not Available | Negative | 3009443 - 3010822 | 51416.4 |
| putative abc transport system permease protein | SAMN06296052_11148 | Not Available | Negative | 3010913 - 3012094 | 44515.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
