Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_11129 | Not Available | Positive | 2983398 - 2986814 | 124029.0 |
| pa14 domain-containing protein | SAMN06296052_11130 | Not Available | Negative | 2986884 - 2989745 | 103994.0 |
| hypothetical protein | SAMN06296052_11131 | Not Available | Positive | 2989933 - 2990079 | 5423.08 |
| hypothetical protein | SAMN06296052_11132 | Not Available | Negative | 2990690 - 2991574 | 34351.9 |
| hypothetical protein | SAMN06296052_11133 | Not Available | Negative | 2991736 - 2992995 | 47235.3 |
| glycosyltransferase, gt2 family | SAMN06296052_11134 | Not Available | Negative | 2992999 - 2993838 | 32225.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_11135 | Not Available | Negative | 2993855 - 2995102 | 47154.2 |
| hypothetical protein | SAMN06296052_11136 | Not Available | Negative | 2995112 - 2996035 | 36332.2 |
| o-antigen ligase | SAMN06296052_11137 | Not Available | Negative | 2996099 - 2997403 | 50198.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_11138 | Not Available | Negative | 2997441 - 2998631 | 44593.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
