Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN06296052_1119 | Not Available | Negative | 2953603 - 2954007 | 15552.6 |
| cu2+-exporting atpase | SAMN06296052_11110 | Not Available | Positive | 2954462 - 2956696 | 80610.4 |
| copper chaperone copz | SAMN06296052_11111 | Not Available | Positive | 2956738 - 2956947 | 7656.11 |
| transmembrane family 220, helix | SAMN06296052_11112 | Not Available | Negative | 2956982 - 2957374 | 14488.8 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN06296052_11113 | Not Available | Positive | 2957934 - 2959328 | 53653.8 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | SAMN06296052_11114 | Not Available | Positive | 2959318 - 2960142 | 31954.9 |
| glucose-1-phosphate cytidylyltransferase | SAMN06296052_11115 | Not Available | Positive | 2960428 - 2961159 | 27535.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN06296052_11116 | Not Available | Positive | 2961230 - 2962291 | 38584.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN06296052_11117 | Not Available | Positive | 2962301 - 2962864 | 21682.6 |
| predicted homoserine dehydrogenase, contains c-terminal saf domain | SAMN06296052_11118 | Not Available | Positive | 2962908 - 2964269 | 48681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
