Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN06296052_110126 | Not Available | Positive | 2918980 - 2921931 | 109177.0 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN06296052_110127 | Not Available | Positive | 2922004 - 2923140 | 42475.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN06296052_110128 | Not Available | Positive | 2923294 - 2925186 | 70359.4 |
| phosphoserine aminotransferase apoenzyme | SAMN06296052_110129 | Not Available | Positive | 2925236 - 2926324 | 40039.4 |
| hypothetical protein | SAMN06296052_110130 | Not Available | Negative | 2926532 - 2927065 | 20636.1 |
| iron-sulfur cluster assembly protein | SAMN06296052_110131 | Not Available | Positive | 2927223 - 2927570 | 12389.8 |
| uncharacterized iron-regulated protein | SAMN06296052_110132 | Not Available | Negative | 2927730 - 2928632 | 34035.0 |
| abc-2 type transport system permease protein | SAMN06296052_110133 | Not Available | Negative | 2928715 - 2930055 | 49691.1 |
| abc-2 type transport system atp-binding protein | SAMN06296052_110134 | Not Available | Negative | 2930048 - 2930959 | 34490.8 |
| molecular chaperone dnaj | SAMN06296052_110135 | Not Available | Negative | 2931159 - 2932307 | 41560.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
