Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN06296052_110116 | Not Available | Negative | 2908311 - 2908871 | 20131.6 |
| rna polymerase rpb6 | SAMN06296052_110117 | Not Available | Negative | 2908881 - 2909210 | 12490.8 |
| beta-barrel assembly machine subunit bamd | SAMN06296052_110118 | Not Available | Negative | 2909221 - 2910045 | 32201.6 |
| osta-like protein | SAMN06296052_110119 | Not Available | Negative | 2910123 - 2911742 | 60598.4 |
| trna(ile)-lysidine synthase | SAMN06296052_110120 | Not Available | Positive | 2911877 - 2913211 | 50156.1 |
| malate dehydrogenase (nad) | SAMN06296052_110121 | Not Available | Positive | 2913368 - 2914306 | 33502.7 |
| barstar (barnase inhibitor) | SAMN06296052_110122 | Not Available | Negative | 2914373 - 2914876 | 19480.9 |
| membrane associated serine protease, rhomboid family | SAMN06296052_110123 | Not Available | Negative | 2914880 - 2915782 | 33382.2 |
| rhomboid family protein | SAMN06296052_110124 | Not Available | Negative | 2915790 - 2916572 | 29553.0 |
| dna mismatch repair protein mutl | SAMN06296052_110125 | Not Available | Negative | 2916694 - 2918556 | 68775.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
