Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN06296052_11096 | Not Available | Positive | 2887526 - 2888137 | 22699.3 |
| acyl-coa thioesterase-1 | SAMN06296052_11097 | Not Available | Negative | 2888199 - 2888750 | 20365.7 |
| conserved hypothetical protein | SAMN06296052_11098 | Not Available | Negative | 2888866 - 2889321 | 16982.7 |
| carboxyl-terminal processing protease | SAMN06296052_11099 | Not Available | Positive | 2889605 - 2891680 | 77689.4 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN06296052_110100 | Not Available | Positive | 2891764 - 2893518 | 62489.8 |
| hypothetical protein | SAMN06296052_110101 | Not Available | Negative | 2893519 - 2893917 | 14020.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_110102 | Not Available | Negative | 2894054 - 2896510 | 89226.0 |
| cystathionine beta-lyase | SAMN06296052_110103 | Not Available | Negative | 2896739 - 2897896 | 43133.9 |
| hypothetical protein | SAMN06296052_110104 | Not Available | Positive | 2898151 - 2899179 | 39745.1 |
| lysyl-trna synthetase, class ii | SAMN06296052_110105 | Not Available | Positive | 2899421 - 2900962 | 59549.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
