Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation factor sua5 | SAMN06296052_11076 | Not Available | Positive | 2867306 - 2867932 | 22933.4 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN06296052_11077 | Not Available | Negative | 2867999 - 2868904 | 34994.4 |
| wbqc-like protein family protein | SAMN06296052_11078 | Not Available | Positive | 2869083 - 2869688 | 23673.4 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN06296052_11079 | Not Available | Positive | 2869811 - 2872417 | 96984.2 |
| propionyl-coa carboxylase beta chain | SAMN06296052_11080 | Not Available | Positive | 2872449 - 2874173 | 63434.4 |
| putative aminopeptidase frvx | SAMN06296052_11081 | Not Available | Positive | 2874269 - 2875339 | 39961.3 |
| hypothetical protein | SAMN06296052_11082 | Not Available | Positive | 2875445 - 2875687 | 9297.7 |
| substrate-binding protein | SAMN06296052_11083 | Not Available | Positive | 2875778 - 2876566 | 29701.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN06296052_11084 | Not Available | Negative | 2876619 - 2877848 | 45326.6 |
| 3-dehydroquinate synthase | SAMN06296052_11085 | Not Available | Negative | 2877845 - 2878882 | 39048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
