Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06296052_11066 | Not Available | Negative | 2857274 - 2858038 | 27150.4 |
| l-rhamnose mutarotase | SAMN06296052_11067 | Not Available | Negative | 2858061 - 2858402 | 13465.2 |
| mfs transporter, fhs family, l-fucose permease | SAMN06296052_11068 | Not Available | Negative | 2858492 - 2859829 | 48496.1 |
| start domain-containing protein | SAMN06296052_11069 | Not Available | Negative | 2860073 - 2860687 | 23232.2 |
| glucokinase | SAMN06296052_11070 | Not Available | Negative | 2860841 - 2861818 | 34748.7 |
| Trna-ser | Not Available | Not Available | Positive | 2862310 - 2862394 | Not Available |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06296052_11072 | Not Available | Negative | 2862503 - 2864362 | 71766.7 |
| membrane protein | SAMN06296052_11073 | Not Available | Negative | 2864468 - 2865436 | 36908.0 |
| acyl-coa thioester hydrolase | SAMN06296052_11074 | Not Available | Negative | 2865433 - 2865846 | 16208.7 |
| upf0755 protein | SAMN06296052_11075 | Not Available | Negative | 2865945 - 2867021 | 40884.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
