Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| suse outer membrane protein | SAMN06296052_11056 | Not Available | Negative | 2841759 - 2842784 | 36237.5 |
| starch-binding associating with outer membrane | SAMN06296052_11057 | Not Available | Negative | 2842810 - 2844369 | 57053.5 |
| iron complex outermembrane recepter protein | SAMN06296052_11058 | Not Available | Negative | 2844417 - 2847575 | 114279.0 |
| hypothetical protein | SAMN06296052_11059 | Not Available | Negative | 2848130 - 2849803 | 64609.9 |
| hypothetical protein | SAMN06296052_11060 | Not Available | Negative | 2849922 - 2850131 | 7625.25 |
| fructan beta-fructosidase | SAMN06296052_11061 | Not Available | Negative | 2850175 - 2851824 | 61079.6 |
| lea14-like dessication related protein | SAMN06296052_11062 | Not Available | Positive | 2852133 - 2854619 | 93032.0 |
| l-fucose dehydrogenase | SAMN06296052_11063 | Not Available | Negative | 2854703 - 2855491 | 28066.3 |
| l-fuconolactonase | SAMN06296052_11064 | Not Available | Negative | 2855507 - 2856340 | 32081.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06296052_11065 | Not Available | Negative | 2856327 - 2857184 | 31403.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
