Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN06296052_11046 | Not Available | Positive | 2819475 - 2820638 | 44009.9 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN06296052_11047 | Not Available | Negative | 2821199 - 2822551 | 48997.0 |
| alpha-l-fucosidase | SAMN06296052_11048 | Not Available | Negative | 2822810 - 2824189 | 52991.4 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN06296052_11049 | Not Available | Positive | 2824652 - 2828080 | 125846.0 |
| predicted dehydrogenase | SAMN06296052_11050 | Not Available | Negative | 2828355 - 2829698 | 50560.0 |
| protein of unknown function | SAMN06296052_11051 | Not Available | Negative | 2829790 - 2831205 | 52253.6 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN06296052_11052 | Not Available | Negative | 2831261 - 2833663 | 89241.1 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN06296052_11053 | Not Available | Negative | 2834654 - 2836843 | 82944.0 |
| carbohydrate binding module (family 6) | SAMN06296052_11054 | Not Available | Negative | 2837001 - 2839730 | 101493.0 |
| alpha-amylase | SAMN06296052_11055 | Not Available | Negative | 2840029 - 2841390 | 50843.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
