Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | SAMN06296052_11026 | Not Available | Negative | 2781883 - 2782860 | 34870.1 |
| alpha-1,2-mannosidase, putative | SAMN06296052_11027 | Not Available | Positive | 2783399 - 2785714 | 88007.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06296052_11028 | Not Available | Positive | 2785759 - 2786595 | 31576.6 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN06296052_11029 | Not Available | Positive | 2786655 - 2787818 | 43435.7 |
| hypothetical protein | SAMN06296052_11030 | Not Available | Positive | 2787878 - 2789293 | 53044.3 |
| beta-xylosidase | SAMN06296052_11031 | Not Available | Negative | 2789508 - 2791130 | 59651.6 |
| beta-xylosidase, gh43 family | SAMN06296052_11032 | Not Available | Negative | 2791205 - 2792293 | 40037.1 |
| fg-gap repeat-containing protein | SAMN06296052_11033 | Not Available | Negative | 2792328 - 2795702 | 124733.0 |
| starch-binding associating with outer membrane | SAMN06296052_11034 | Not Available | Negative | 2795943 - 2797628 | 63644.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_11035 | Not Available | Negative | 2797667 - 2800750 | 113155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
