Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN06296052_1106 | Not Available | Negative | 2744775 - 2746646 | 69309.3 |
| polysaccharide deacetylase | SAMN06296052_1107 | Not Available | Negative | 2746918 - 2747559 | 24486.1 |
| n-terminal ig-like domain of cellulase | SAMN06296052_1108 | Not Available | Negative | 2747619 - 2749484 | 69110.1 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN06296052_1109 | Not Available | Negative | 2749543 - 2751084 | 59869.7 |
| starch-binding associating with outer membrane | SAMN06296052_11010 | Not Available | Negative | 2751159 - 2752865 | 63611.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_11011 | Not Available | Negative | 2752885 - 2756139 | 120496.0 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06296052_11012 | Not Available | Negative | 2756412 - 2757662 | 45964.4 |
| alpha-1,2-mannosidase, putative | SAMN06296052_11013 | Not Available | Positive | 2758274 - 2760574 | 85455.6 |
| predicted neuraminidase (sialidase) | SAMN06296052_11014 | Not Available | Negative | 2760735 - 2761778 | 38896.2 |
| glycosyl hydrolase-like 10 | SAMN06296052_11015 | Not Available | Negative | 2761853 - 2762941 | 42168.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
