Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | SAMN06296052_109165 | Not Available | Positive | 2727052 - 2729493 | 90425.0 |
| hypothetical protein | SAMN06296052_109166 | Not Available | Negative | 2730120 - 2730215 | 3614.59 |
| hypothetical protein | SAMN06296052_109167 | Not Available | Negative | 2730212 - 2730682 | 17786.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN06296052_109168 | Not Available | Negative | 2730923 - 2732833 | 70981.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN06296052_109169 | Not Available | Negative | 2733468 - 2735234 | 65635.9 |
| hypothetical protein | SAMN06296052_1101 | Not Available | Negative | 2736259 - 2736352 | 3525.22 |
| d-lactate dehydrogenase | SAMN06296052_1102 | Not Available | Negative | 2736407 - 2739217 | 103316.0 |
| na+/proline symporter | SAMN06296052_1103 | Not Available | Negative | 2739241 - 2740755 | 55893.2 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN06296052_1104 | Not Available | Negative | 2740859 - 2741698 | 29808.9 |
| beta-glucosidase | SAMN06296052_1105 | Not Available | Negative | 2741744 - 2744713 | 109106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
