Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium characterized as a heterotroph and requiring aerobic conditions for growth. This species is non-motile and exhibits mesophilic growth characteristics, with an optimal temperature of 29°C. The bacterium has a single replicon, which is indicative of its genetic organization. Its accession number is FZOQ00000000.1, providing a reference for genomic studies and further research into its biological functions. The ecological significance of Pontibacter ummariensis may lie in its role within microbial communities, particularly in environments where organic matter decomposition occurs. As a heterotrophic organism, it likely contributes to nutrient cycling by breaking down organic compounds, thus facilitating the availability of nutrients for other organisms in its ecosystem. Understanding the traits and ecological roles of such microorganisms can provide insights into their contributions to environmental health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis strain NKM1 genome assembly, contig:

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxypeptidase regulatory-like domain-containing proteinSAMN06296052_109165Not AvailablePositive2727052 - 272949390425.0
hypothetical proteinSAMN06296052_109166Not AvailableNegative2730120 - 27302153614.59
hypothetical proteinSAMN06296052_109167Not AvailableNegative2730212 - 273068217786.6
cubico group peptidase, beta-lactamase class c familySAMN06296052_109168Not AvailableNegative2730923 - 273283370981.9
cubico group peptidase, beta-lactamase class c familySAMN06296052_109169Not AvailableNegative2733468 - 273523465635.9
hypothetical proteinSAMN06296052_1101Not AvailableNegative2736259 - 27363523525.22
d-lactate dehydrogenaseSAMN06296052_1102Not AvailableNegative2736407 - 2739217103316.0
na+/proline symporterSAMN06296052_1103Not AvailableNegative2739241 - 274075555893.2
n-acetylmuramic acid 6-phosphate etheraseSAMN06296052_1104Not AvailableNegative2740859 - 274169829808.9
beta-glucosidaseSAMN06296052_1105Not AvailableNegative2741744 - 2744713109106.0

Displaying genes 2471 – 2480 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.