Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_109125 | Not Available | Negative | 2676225 - 2676374 | 5294.13 |
| hypothetical protein | SAMN06296052_109126 | Not Available | Negative | 2676438 - 2676590 | 5345.06 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN06296052_109127 | Not Available | Positive | 2677049 - 2677939 | 32076.9 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN06296052_109128 | Not Available | Negative | 2678095 - 2678907 | 29426.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_109129 | Not Available | Positive | 2678957 - 2680078 | 42708.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06296052_109130 | Not Available | Positive | 2680163 - 2681161 | 36353.3 |
| iron (metal) dependent repressor, dtxr family | SAMN06296052_109131 | Not Available | Positive | 2681187 - 2681942 | 28385.3 |
| manganese transport protein | SAMN06296052_109132 | Not Available | Positive | 2682174 - 2684057 | 68842.8 |
| thioredoxin-related protein | SAMN06296052_109133 | Not Available | Positive | 2684250 - 2684834 | 21869.4 |
| trna modification gtpase trme | SAMN06296052_109134 | Not Available | Positive | 2685174 - 2686553 | 50114.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
